NAME

       alignment-find - Find the last (or first) FASTA alignment in a file.

SYNOPSIS

       alignment-find [OPTIONS] < in-file

DESCRIPTION

       Find the last (or first) FASTA alignment in a file.

ALLOWED OPTIONS:

       -h, –help
              produce help message

       –alphabet arg
              Specify the alphabet: DNA, RNA, Amino-Acids, Amino-Acids+stop, Triplets, Codons, or Codons+stop.

       –first get the first alignment in the file

       –last  get the last alignment in the file (default)

REPORTING BUGS:

       BAli-Phy online help: http://www.bali-phy.org/docs.php.

       Please send bug reports to bali-phy-users@googlegroups.com.

AUTHORS

       Benjamin Redelings.

                                                    Feb 2018                                   alignment-find(1)