Provided by: libvcflib-tools_1.0.12+dfsg-1_amd64 bug

NAME
       vcfevenregions


SYNOPSIS
       vcfevenregions options


DESCRIPTION
       Generates  a list of regions, e.g. chr20:10..30 using the variant density information provided in the VCF
       file to ensure that the regions have even numbers of variants.  This can be use to reduce the variance in
       runtime when dividing variant detection or genotyping by genomic coordinates.


OPTIONS
              options:
                  -f, --fasta-reference REF    FASTA reference file to use to obtain primer sequences.
                  -n, --number-of-regions N    The number of desired regions.
                  -p, --number-of-positions N  The number of positions per region.
                  -o, --offset N               Add an offset to region positioning, to avoid boundary
                                               related artifacts in downstream processing.
                  -l, --overlap N              The number of sites to overlap between regions.  Default 0.
                  -s, --separator SEQ          Specify string to use to separate region output.  Default '-'

              Type: transformation


EXIT VALUES
       0      Success

       not 0  Failure


SEE ALSO
       vcflib(1)


OTHER
LICENSE
       Copyright 2011-2024 (C) Erik Garrison and vcflib contributors.  MIT licensed.   Copyright  2020-2024  (C)
       Pjotr Prins.


AUTHORS
       Erik Garrison and vcflib contributors.

vcfevenregions (vcflib)                                                                        VCFEVENREGIONS(1)