NAME

       rgfa-findcrisprs - find CRISPRs in assembly graphs

SYNOPSIS

       rgfa-findcrisprs <gfa>

DESCRIPTION

       Finds CRISPRs given in assembly graphs specified by a GFA file. CRISPRs have a structure ARU1RU..RUnRB
       where |U|~|R| in [24..50].

SEE ALSO

       gfadiff(1), rgfa-mergelinear(1), rgfa-simdebruijn(1)

BUGS

       Please report bugs to the RGFA issue tracker: https://github.com/ggonnella/rgfa/issues

                                                                                             RGFA-FINDCRISPRS(1)