NAME

       parmed: - parameter file editor

DESCRIPTION

       usage: parmed [-h] [-v] [-i FILE] [-p <prmtop>] [-c <inpcrd>] [-O] [-l FILE]

              [--prompt PROMPT] [-n] [-e] [-s] [-r] [<prmtop>] [<script>]

   positional arguments:
       <prmtop>
              Topology file to analyze.

       <script>
              File with a series of ParmEd commands to execute.

   options:
       -h, --help
              show this help message and exit

       -v, --version
              show program's version number and exit

   Input Files:
       -i FILE, --input FILE
              Script  with ParmEd commands to execute. Default reads from stdin. Can be specified multiple times
              to process multiple input files.

       -p <prmtop>, --parm <prmtop>
              List of topology files to load into ParmEd. Can be specified multiple times  to  process  multiple
              topologies.

       -c <inpcrd>, --inpcrd <inpcrd>
              List  of  inpcrd  files  to  load into ParmEd. They are paired with the topology files in the same
              order that each set of files is specified on the command-line.

   Output Files:
       -O, --overwrite
              Allow ParmEd to overwrite existing files.

       -l FILE, --logfile FILE
              Log file with every command executed during an interactive ParmEd session. Default is parmed.log

   Interpreter Options:
              These options affect how the ParmEd interpreter behaves in certain cases.

       --prompt PROMPT
              String to use as a command prompt.

       -n, --no-splash
              Prevent printing the greeting logo.

       -e, --enable-interpreter
              Allow arbitrary single Python commands or blocks of Python code  to  be  run.  By  default  Python
              commands  will  not  be  run as a safeguard for your system. Make sure you trust the source of the
              ParmEd command before turning this option on.

   Error Handling:
              These options control how ParmEd handles various errors and warnings that appear occur during  the
              course of Action execution

       -s, --strict
              Prevent  scripts  from  running  past  unrecognized  input  and actions that end with an error. In
              interactive mode, actions with unrecognized inputs and failed actions  prevent  any  changes  from
              being made to the topology, but does not quit the interpreter. This is the default behavior.

       -r, --relaxed
              Scripts  ignore  unrecognized input and simply skip over failed actions, executing the rest of the
              script.  Unrecognized input in the interactive interpreter emits a non-fatal warning.

parmed: Version 4.1.0                            September 2023                                       PARMED:(1)