Provided by: grass-doc_7.8.7-1_all bug

NAME

       t.rast.algebra   -  Apply  temporal  and  spatial operations on space time raster datasets using temporal
       raster algebra.

KEYWORDS

       temporal, algebra, raster, time

SYNOPSIS

       t.rast.algebra
       t.rast.algebra --help
       t.rast.algebra [-sngd] expression=string basename=string  [suffix=string]    [nprocs=integer]    [--help]
       [--verbose]  [--quiet]  [--ui]

   Flags:
       -s
           Check the spatial topology of temporally related maps and process only spatially related maps

       -n
           Register Null maps

       -g
           Use granularity sampling instead of the temporal topology approach

       -d
           Perform a dry run, compute all dependencies and module calls but don’t run them

       --help
           Print usage summary

       --verbose
           Verbose module output

       --quiet
           Quiet module output

       --ui
           Force launching GUI dialog

   Parameters:
       expression=string [required]
           r.mapcalc expression for temporal and spatial analysis of space time raster datasets

       basename=string [required]
           Basename of the new generated output maps
           A numerical suffix separated by an underscore will be attached to create a unique identifier

       suffix=string
           Suffix  to  add  at  basename: set ’gran’ for granularity, ’time’ for the full time format, ’num’ for
           numerical suffix with a specific number of digits (default %05)
           Default: num

       nprocs=integer
           Number of r.mapcalc processes to run in parallel
           Default: 1

DESCRIPTION

       t.rast.algebra performs temporal and spatial map algebra operations on space time raster datasets (STRDS)
       using the temporal raster algebra.

   PROGRAM USE
       The module expects an expression as input parameter in the following form:

       "result = expression"

       The statement structure is similar to that of r.mapcalc.  In this statement, result represents  the  name
       of the space time raster dataset (STRDS) that will contain the result of the calculation that is given as
       expression  on  the  right  side  of  the  equality  sign.   These expressions can be any valid or nested
       combination of temporal operations and spatial overlay or buffer  functions  that  are  provided  by  the
       temporal algebra.

       The  temporal  raster  algebra  works  only with space time raster datasets (STRDS). The algebra provides
       methods for map selection based on their temporal relations. It is  also  possible  to  temporally  shift
       maps,  to  create  temporal  buffer  and  to  snap  time  instances  to create a valid temporal topology.
       Furthermore, expressions can be nested and evaluated in conditional  statements  (if,  else  statements).
       Within  if-statements,  the  algebra  provides temporal variables like start time, end time, day of year,
       time differences or number of maps per time interval to build up conditions.
       In addition the algebra provides a subset of the spatial operations from r.mapcalc. All these  operations
       can be assigned to STRDS or to the map lists resulting of operations between STRDS.

       By  default,  only  temporal topological relations among space time datasets (STDS) are evaluated. The -s
       flag can be used to additionally activate the evaluation of the spatial topology  based  on  the  spatial
       extent of maps.

       The expression option must be passed as quoted expression, for example:
       t.rast.algebra expression="C = A + B" basename=result
       Where  C  is  the  new  space time raster dataset that will contain maps with the basename "result" and a
       numerical suffix separated by an underscore that  represent  the  sum  of  maps  from  the  STRDS  A  and
       temporally equal maps (i.e., maps with equal temporal topology relation) from the STRDS B.

       The map basename for the result STRDS must always be specified.

TEMPORAL RASTER ALGEBRA

       The  temporal algebra provides a wide range of temporal operators and functions that will be presented in
       the following section.

   TEMPORAL RELATIONS
       Several temporal topology relations are supported between maps registered in space time datasets:
       equals            A ------
                         B ------
       during            A  ----
                         B ------
       contains          A ------
                         B  ----
       starts            A ----
                         B ------
       started           A ------
                         B ----
       finishs           A   ----
                         B ------
       finished          A ------
                         B   ----
       precedes          A ----
                         B     ----
       follows           A     ----
                         B ----
       overlapped        A   ------
                         B ------
       overlaps          A ------
                         B   ------
       over              both overlaps and overlapped
       The relations must be read as: A is related to B, like - A equals B - A is during B - A contains B.

       Topological relations must be specified with curly brackets {}.

   TEMPORAL OPERATORS
       The temporal algebra defines temporal operators that can be combined  with  other  operators  to  perform
       spatio-temporal  operations.   The  temporal  operators  process  the time instances and intervals of two
       temporally related maps and calculate the resulting temporal extent in five possible different ways.
       LEFT REFERENCE     l       Use the time stamp of the left space time dataset
       INTERSECTION       i       Intersection
       DISJOINT UNION     d       Disjoint union
       UNION              u       Union
       RIGHT REFERENCE    r       Use the time stamp of the right space time dataset

   TEMPORAL SELECTION
       The temporal selection simply selects parts of a space time dataset  without  processing  any  raster  or
       vector  data.  The  algebra provides a selection operator : that by default selects parts of a space time
       dataset that are temporally equal to parts of a second space time dataset. The following expression
       C = A : B
       means: select all parts of space time dataset A that are equal to B and store them in space time  dataset
       C. These parts are time stamped maps.

       In  addition,  the  inverse selection operator !: is defined as the complement of the selection operator,
       hence the following expression
       C = A !: B
       means: select all parts of space time time dataset A that are not equal to B and store them in space time
       dataset C.

       To select parts of a STRDS using different topological relations regarding to other STRDS,  the  temporal
       topology  selection  operator can be used. This operator consists of the temporal selection operator, the
       topological relations that must be separated by the logical  OR  operator  |  and,  the  temporal  extent
       operator.  All three parts are separated by comma and surrounded by curly brackets as follows: {"temporal
       selection operator", "topological relations", "temporal operator"}.

       Examples:
       C = A {:,equals} B
       C = A {!:,equals} B
       We can now define arbitrary topological relations using the OR operator "|" to connect them:
       C = A {:,equals|during|overlaps} B
       Select all parts of A that are equal to B, during B or overlaps B.
       In addition, we can define the temporal extent of the resulting STRDS by adding the temporal operator.
       C = A {:,during,r} B
       Select all parts of A that are during B and use the temporal extents from B for C.
       The selection operator is implicitly contained in the temporal topology selection operator, so  that  the
       following statements are exactly the same:
       C = A : B
       C = A {:} B
       C = A {:,equal} B
       C = A {:,equal,l} B
       Same for the complementary selection:
       C = A !: B
       C = A {!:} B
       C = A {!:,equal} B
       C = A {!:,equal,l} B

   CONDITIONAL STATEMENTS
       Selection  operations  can  be evaluated within conditional statements as showed below. Note that A and B
       can be either space time datasets or expressions. The temporal relationship between  the  conditions  and
       the  conclusions  can  be defined at the beginning of the if statement (third and fourth examples below).
       The relationship between then and else conclusion must be always equal.
       if statement                        decision option                        temporal relations
         if(if, then, else)
         if(conditions, A)                   A if conditions are True;              temporal topological relation between if and then is equal.
         if(conditions, A, B)                A if conditions are True, B otherwise; temporal topological relation between if, then and else is equal.
         if(topologies, conditions, A)       A if conditions are True;              temporal topological relation between if and then is explicitly specified by topologies.
         if(topologies, conditions, A, B)    A if conditions are True, B otherwise; temporal topological relation between if, then and else is explicitly specified by topologies.
       The conditions are comparison expressions that are used to evaluate space time datasets. Specific  values
       of temporal variables are compared by logical operators and evaluated for each map of the STRDS.
       Important: The conditions are evaluated from left to right.

   Logical operators
       Symbol  description
         ==    equal
         !=    not equal
         >     greater than
         >=    greater than or equal
         <     less than
         <=    less than or equal
         &&    and
         ||    or

   Temporal functions
       The following temporal functions are evaluated only for the STDS that must be given in parenthesis.
       td(A)                    Returns a list of time intervals of STDS A
       start_time(A)            Start time as HH::MM:SS
       start_date(A)            Start date as yyyy-mm-DD
       start_datetime(A)        Start datetime as yyyy-mm-DD HH:MM:SS
       end_time(A)              End time as HH:MM:SS
       end_date(A)              End date as yyyy-mm-DD
       end_datetime(A)          End datetime as  yyyy-mm-DD HH:MM
       start_doy(A)             Day of year (doy) from the start time [1 - 366]
       start_dow(A)             Day of week (dow) from the start time [1 - 7], the start of the week is Monday == 1
       start_year(A)            The year of the start time [0 - 9999]
       start_month(A)           The month of the start time [1 - 12]
       start_week(A)            Week of year of the start time [1 - 54]
       start_day(A)             Day of month from the start time [1 - 31]
       start_hour(A)            The hour of the start time [0 - 23]
       start_minute(A)          The minute of the start time [0 - 59]
       start_second(A)          The second of the start time [0 - 59]
       end_doy(A)               Day of year (doy) from the end time [1 - 366]
       end_dow(A)               Day of week (dow) from the end time [1 - 7], the start of the week is Monday == 1
       end_year(A)              The year of the end time [0 - 9999]
       end_month(A)             The month of the end time [1 - 12]
       end_week(A)              Week of year of the end time [1 - 54]
       end_day(A)               Day of month from the start time [1 - 31]
       end_hour(A)              The hour of the end time [0 - 23]
       end_minute(A)            The minute of the end time [0 - 59]
       end_second(A)            The second of the end time [0 - 59]

   Comparison operator
       As  mentioned  above,  the  conditions  are  comparison  expressions that are used to evaluate space time
       datasets. Specific values of temporal variables are compared by logical operators and evaluated for  each
       map  of  the  STDS  and (optionally) related maps.  For complex relations, the comparison operator can be
       used to combine conditions.
       The structure is  similar  to  the  select  operator  with  the  addition  of  an  aggregation  operator:
       {"comparison operator", "topological relations", aggregation operator, "temporal operator"}
       This aggregation operator (| or &) defines the behaviour when a map is related to more than one map, e.g.
       for the topological relation ’contains’.  Should all (&) conditions for the related maps be true or is it
       sufficient  to  have  any (|) condition that is true. The resulting boolean value is then compared to the
       first condition by the comparison operator (|| or &&).  By default, the aggregation operator  is  related
       to the comparison operator:
       comparison operator -> aggregation operator:
       || -> | and && -> &
       Examples:
       Condition 1 {||, equal, r} Condition 2
       Condition 1 {&&, equal|during, l} Condition 2
       Condition 1 {&&, equal|contains, |, l} Condition 2
       Condition 1 {&&, equal|during, l} Condition 2 && Condition 3
       Condition 1 {&&, equal|during, l} Condition 2 {&&,contains, |, r} Condition 3

   Hash operator
       Additionally, the number of maps in intervals can be computed and used in conditional statements with the
       hash (#) operator.
       A {#, contains} B
       This expression computes the number of maps from space time dataset B which are during the time intervals
       of maps from space time dataset A.
       A list of integers (scalars) corresponding to the maps of A that contain maps from B will be returned.
       C = if({equal}, A {#, contains} B > 2, A {:, contains} B)
       This expression selects all maps from A that temporally contain at least 2 maps from B and stores them in
       space  time  dataset  C.  The leading equal statement in the if condition specifies the temporal relation
       between the if and then part of the if expression. This is very important, so we do not need to specify a
       global time reference (a space time dataset) for temporal processing.

       Furthermore, the temporal algebra allows temporal buffering, shifting and  snapping  with  the  functions
       buff_t(), tshift() and tsnap(), respectively.
       buff_t(A, size)         Buffer STDS A with granule ("1 month" or 5)
       tshift(A, size)         Shift STDS A with granule ("1 month" or 5)
       tsnap(A)                Snap time instances and intervals of STDS A

   Single map with temporal extent
       The temporal algebra can also handle single maps with time stamps in the tmap() function.
       tmap()
       For example:
       C = A {:, during} tmap(event)
       This  statement  selects  all  maps from space time data set A that are during the temporal extent of the
       single map ’event’

   Spatial raster operators
       The module supports the following raster operations:
       Symbol  description     precedence
         %     modulus         1
         /     division        1
         *     multiplication  1
         +     addition        2
         -     subtraction     2
       And raster functions:
       abs(x)                  return absolute value of x
       float(x)                convert x to foating point
       int(x)                  convert x to integer [ truncates ]
       log(x)                  natural log of x
       sqrt(x)                 square root of x
       tan(x)                  tangent of x (x is in degrees)
       round(x)                round x to nearest integer
       sin(x)                  sine of x (x is in degrees)
       isnull(x)               check if x = NULL
       isntnull(x)             check if x is not NULL
       null                    set null value
       exist(x)                Check if x is in the current mapset

   Single raster map
       The temporal raster algebra features also a function to integrate single raster maps without time  stamps
       into the expressions.
       map()
       For example:
       C = A * map(constant_value)
       This  statement  multiplies  all  raster  maps  from  space  time  raster  data set A with the raster map
       ’constant_value’

   Combinations of temporal, raster and select operators
       The user can combine the temporal topology relations,  the  temporal  operators  and  the  spatial/select
       operators to create spatio-temporal operators as follows:
       {"spatial or select operator", "list of temporal relations", "temporal operator"}
       For multiple topological relations or several related maps the spatio-temporal operators feature implicit
       aggregation.   The  algebra  evaluates  the  stated STDS by their temporal topologies and apply the given
       spatio-temporal operators in a aggregated form.  If we have two STDS A and B, B has three maps:  b1,  b2,
       b3  that  are  all  during  the  temporal extent of the single map a1 of A, then the following arithmetic
       calculations would implicitly aggregate all maps of B into one result map for a1 of A:
        C = A {+, contains} B --> c1 = a1 + b1 + b2 + b3

       Important: the aggregation behaviour is not symmetric
        C = B {+, during} A --> c1 = b1 + a1
                                c2 = b2 + a1
                                c3 = b3 + a1

   Temporal neighbourhood modifier
       The neighbourhood modifier of r.mapcalc is extended for the temporal raster  algebra  with  the  temporal
       dimension.  The  format is strds[t,r,c], where t is the temporal offset, r is the row offset and c is the
       column offset.
       strds[2]
       refers to the second successor of the current map.

       strds[1,2]
       refers to the cell one row below and two columns to the right of the current cell in the current map.

       strds[1,-2,-1]
       refers to the cell two rows above and one column to the left of the current cell of the  first  successor
       map.

       strds[-2,0,1]
       refers to the cell one column to the right of the current cell in the second predecessor map.

EXAMPLES

   Computation of NDVI
       # Sentinel-2 bands are stored separately in two STDRS "S2_b4" and "S2_b8"
       g.region raster=sentinel2_B04_10m -p
       t.rast.list S2_b4
       t.rast.list S2_b8
       t.rast.algebra basename=ndvi expression="ndvi = float(S2_b8 - S2_b4) / ( S2_b8 + S2_b4 )"
       t.rast.colors input=ndvi color=ndvi

   Sum of space-time raster datasets
       Sum  maps from STRDS A with maps from STRDS B which have equal time stamps and are temporally before Jan.
       1. 2005 and store them in STRDS D:
       D = if(start_date(A) < "2005-01-01", A + B)
       Create the sum of all maps from STRDS A and B that have equal time stamps and store the new maps in STRDS
       C:
       C = A + B

   Sum of space-time raster datasets with temporal topology relation
       Same expression with explicit definition of the temporal topology relation and temporal operators:
       C = A {+,equal,l} B

   Selection of raster cells
       Select all cells from STRDS B with equal temporal relations to STRDS A, if the cells  of  A  are  in  the
       range [100.0, 1600] of time intervals that have more than 30 days (Jan, Mar, May, Jul, Aug, Oct, Dec):
       C = if(A > 100 && A < 1600 && td(A) > 30, B)

   Selection of raster cells with temporal topology relation
       Same expression with explicit definition of the temporal topology relation and temporal operators:
       C = if({equal}, A > 100 && A < 1600 {&&,equal} td(A) > 30, B)

   Conditional computation
       Compute  the  recharge  in  meters  per  second  for  all cells of precipitation STRDS "Prec" if the mean
       temperature specified in STRDS "Temp" is higher than 10 degrees. Computation is performed if STRDS "Prec"
       and "Temp" have equal time stamps. The number of days or fraction of days per interval is computed  using
       the td() function that has as argument the STRDS "Prec":
       C = if(Temp > 10.0, Prec / 3600.0 / 24.0 / td(Prec))

   Conditional computation with temporal topology relation
       Same expression with explicit definition of the temporal topology relation and temporal operators:
       C = if({equal}, Temp > 10.0, Prec / 3600.0 / 24.0 {/,equal,l} td(Prec))

   Computation with time intervals
       Compute the mean value of all maps from STRDS A that are located during time intervals of STRDS B if more
       than  one  map  of  A is contained in an interval of B, use A otherwise. The resulting time intervals are
       either from B or A:
       C = if(B {#,contain} A > 1, (B {+,contain,l} A - B) / (B {#,contain} A), A)

   Computation with time intervals with temporal topology relation
       Same expression with explicit definition of the temporal topology relation and temporal operators:
       C = if({equal}, B {#,contain} A > 1, (B {+,contain,l} A {-,equal,l} B) {equal,=/} (B {#,contain} A), A)

SEE ALSO

        r.mapcalc, t.vect.algebra, t.rast3d.algebra, t.select, t.rast3d.mapcalc, t.rast.mapcalc

       Temporal data processing Wiki

REFERENCES

       The use of this module requires the following software to be installed: PLY(Python-Lex-Yacc)

       # Ubuntu/Debian
       sudo apt-get install python3-ply
       # Fedora
       sudo dnf install python3-ply
       # MS-Windows (OSGeo4W: requires "python3-pip" package to be installed)
       python3-pip install ply

       Related publications:

           •   Gebbert, S., Pebesma, E. 2014. TGRASS: A temporal GIS for  field  based  environmental  modeling.
               Environmental Modelling & Software 53, 1-12 (DOI) - preprint PDF

           •   Gebbert,  S.,  Pebesma,  E.  2017.  The  GRASS  GIS  temporal framework. International Journal of
               Geographical Information Science 31, 1273-1292 (DOI)

           •   Gebbert, S., Leppelt, T., Pebesma, E., 2019. A topology based spatio-temporal map algebra for big
               data analysis.  Data 4, 86. (DOI)

SEE ALSO

        v.overlay, v.buffer, v.patch, r.mapcalc

AUTHORS

       Thomas Leppelt, Sören Gebbert, Thünen Institute of Climate-Smart Agriculture

SOURCE CODE

       Available at: t.rast.algebra source code (history)

       Accessed: unknown

       Main index | Temporal index | Topics index | Keywords index | Graphical index | Full index

       © 2003-2022 GRASS Development Team, GRASS GIS 7.8.7 Reference Manual

GRASS 7.8.7                                                                               t.rast.algebra(1grass)